(1) Dynamic modifications of biomacromolecules: mechanism and chemical interventions, SCIENCE CHINA Life Sciences., 2019-09, 第 11 作者
(2) Pushing the Boundaries of Molecular Representation for Drug Discovery with the Graph Attention Mechanism, J. Med. Chem., 2019-08, 第 11 作者
(3) Improving the Virtual Screening Ability of Target-Specific Scoring Functions Using Deep Learning Methods, Frontiers in Pharmacology., 2019-08, 第 12 作者
(4) Discovery, structural insight, and bioactivities of BY27 as a selective inhibitor of the second bromodomains of BET proteins., European Journal of Medicinal Chemistry, 2019-08, 第 12 作者
(5) Nature brings new avenues to the therapy of central nervous system diseases—an overview of possible treatments derived from natural products., SCIENCE CHINA Life Sciences, 2019-08, 第 11 作者
(6) Deep Learning Enhancing Kinome-Wide Polypharmacology Profiling: Model Construction and Experiment Validation., J. Med. Chem., 2019-07, 第 11 作者
(7) Discovery and Development of a Series of Pyrazolo[3,4 d]pyridazinone Compounds as the Novel Covalent Fibroblast Growth Factor Receptor Inhibitors by the Rational Drug Design, J. Med. Chem., 2019-07, 第 12 作者
(8) SNX10 (sorting nexin 10) inhibits colorectal cancer initiation and progression by controlling autophagic degradation of SRC, AUTOPHAGY, 2019-07, 第 12 作者
(9) High-resolution mapping of brain vasculature and its impairment in the hippocampus of Alzheimer’s disease mice, National Science Review, 2019-07, 第 11 作者
(10) KinomeX: a web application for predicting kinome-wide polypharmacology effect of small molecules., Bioinformatics, 2019-06, 第 11 作者
(11) The dynamic conformational landscape of the protein methyltransferase SETD8., eLife, 2019-05, 第 12 作者
(12) Pharmacokinetics-Driven Optimization of 4(3H)-Pyrimidinones as Phosphodiesterase Type 5 Inhibitors Leading to TPN171, a Clinical Candidate for the Treatment of Pulmonary Arterial Hypertension., J. Med. Chem, 2019-04, 第 11 作者
(13) Correction to Discovery of a Natural-Product-Derived Preclinical Candidate for Once-Weekly Treatment of Type 2 Diabetes, J. Med. Chem., 2019-04, 第 12 作者
(14) Small-Molecule Targeting of Oncogenic FTO Demethylasein Acute Myeloid Leukemia., Cancer Cell, 2019-04, 第 12 作者
(15) Molecular dynamics simulation revealed the intrinsic conformational change of cellular inhibitor of apoptosis protein-1, J Biomol Struct Dyn, 2019-03, 第 12 作者
(16) The inhibitory mechanism of aurintricarboxylic acid targeting serine/threonine phosphatase Stp1 in Staphylococcus aureus: insights from molecular dynamics simulations, Acta Pharmacologica Sinica, 2019-02, 第 12 作者
(17) Identification of a cellularlyactive SIRT6allosteric activator., Nature Chemical Biology, 2018-12, 第 12 作者
(18) Development and evaluation of a novel series of Nitroxoline-derived BET inhibitors with antitumor activity in renal cell carcinoma, Oncogenesis, 2018-11, 第 12 作者
(19) Rational design of 5-((1H-imidazol-1-yl)methyl) quinolin-8-ol derivatives as novel bromodomain-containing protein 4 inhibitors., European Journal of Medicinal Chemistry, 2018-11, 第 12 作者
(20) Structure-Based Design of 1 ‑ Heteroaryl-1,3-propanediamineDerivatives as a Novel Series of CC-Chemokine Receptor 5 Antagonists, J. Med. Chem., 2018-09, 第 12 作者
(21) Artificial intelligence in drug design., Sci China Life Sci., 2018-07, 第 11 作者
(22) Dynamic States of the Ligand-Free Class A G Protein-Coupled Receptor Extracellular Side., Biochemistry, 2018-07, 第 4 作者
(23) Discovery and biological evaluation of thiobarbituric derivatives as potent p300/CBP inhibitors., Bioorganic & Medicinal Chemistry, 2018-07, 第 12 作者
(24) Structural basis for signal recognition and transduction by platelet-activating-factor receptor., Nat Struct Mol Biol., 2018-06, 第 12 作者
(25) Species-Specific Involvement of Integrin αIIbβ3 in a Monoclonal Antibody CH12 Triggers Off-Target Thrombocytopenia in Cynomolgus Monkeys., Mol Ther., 2018-06, 第 12 作者
(26) Deciphering the role of dimer interface in intrinsic dynamics and allosteric pathways underlying the functional transformation of DNMT3A, BBA - General Subjects, 2018-04, 第 4 作者
(27) A Statistical Thermodynamic Model for Ligands Interacting With Ion Channels: Theoretical Model and Experimental Validation of the KCNQ2 Channel., frontiers in Pharmacology, 2018-03, 第 11 作者
(28) Discovery of 1,8-acridinedione derivatives as novel GCN5 inhibitors via high throughput screening, European Journal of Medicinal Chemistry, 2018-02, 第 12 作者
(29) Discovery of potent DOT1L inhibitors by AlphaLISA based HighThroughput Screening assay., Bioorganic & Medicinal Chemistry, 2018-02, 第 12 作者
(30) Synthesis and biological evaluation of a series of novel pyridinecarboxamides as potential multi-receptor antipsychotic drugs, Bioorg Med Chem Lett., 2018-01, 第 12 作者
(31) Biochemical Studies and Molecular Dynamic Simulations Reveal the Molecular Basis of Conformational Changes in DNA Methyltransferase-1., ACS Chem. Biol., 2018-01, 第 12 作者
(32) Synthesis and biological evaluation of a series of multi-target N-substituted cyclic imide derivatives with potential antipsychotic effect., Eur J Med Chem., 2018-01, 第 12 作者
(33) The Mechanism by Which Luteolin Disrupts the Cytoplasmic Membrane of Methicillin-Resistant Staphylococcus aureus., J. Phys. Chem. B., 2018-01, 第 11 作者
(34) Structure of the glucagon receptor in complex with a glucagon analogue, Nature, 2018-01, 第 12 作者
(35) Characterizing the interactions of two lipid modifcations with lipid rafts: farnesyl anchors vs. palmitoyl anchors., Eur Biophys J., 2017-06, 第 11 作者
(36) Machine-Learning-Assisted Approach for Discovering Novel Inhibitors Targeting Bromodomain-Containing Protein 4, J.Chem.Inf. Model., 2017, 第 10 作者
(37) Characterizing the interactions of two lipid modifcations with lipid rafts: farnesyl anchors vs. palmitoyl anchors, Eur Biophys J., 2017, 第 11 作者
(38) Structure of the full-length glucagon class B G-protein-coupled receptor., Nature., 2017, 第 11 作者
(39) Discovery of novel BRD4 inhibitors by high-throughput screening, crystallography, and cell-based assays, Bioorg Med Chem Lett., 2017, 第 9 作者
(40) Aldehyde Oxidase Mediated Metabolism in Drug-like Molecules: A Combined Computational and Experimental Study., J Med Chem., 2017, 第 8 作者
(41) Discovery of Novel Disruptor of Silencing Telomeric 1‑Like (DOT1L) Inhibitors using a Target-Specific Scoring Function for the (S)‑Adenosyl‑L‑methionine (SAM)-Dependent Methyltransferase Family, J Med Chem., 2017, 第 9 作者
(42) Label-free brainwide visualization of senile plaque using cryo-micro-optical sectioning tomography, Opt Lett., 2017, 第 7 作者
(43) PI-273, a substrate-competitive, specific small molecule inhibitor of PI4KIIα, inhibits the growth of breast cancer cells Running title: The First PI4KIIα Substrate-Competitive Specific Inhibitor., Cancer Res., 2017, 第 10 作者
(44) Computational Studies on Acetylcholinesterases, Molecules., 2017, 第 5 作者
(45) Discovery of potent 2,4-difluoro-linker poly(ADP-ribose) polymerase 1 inhibitors with enhanced water solubility and in vivo anticancer efficacy., Acta Pharmacol Sin., 2017, 第 6 作者
(46) Potent, Selective, and Cell Active Protein Arginine Methyltransferase 5 (PRMT5) Inhibitor Developed by Structure-Based Virtual Screening and Hit Optimization., J. Med. Chem., 2017, 第 8 作者
(47) Small-molecule targeting of E3 ligase adaptor SPOP in kidney cancer, Cancer Cell, 2016, 第 11 作者
(48) Elucidating the druggable interface of protein−protein interactions using fragment docking and coevolutionary analysis, Proceedings of the National Academy of Sciences U.S.A, 2016, 第 11 作者
(49) Identification of Novel Disruptor of Telomeric Silencing 1-like (DOT1L) Inhibitors through Structure-Based Virtual Screening and Biological Assays, J Chem Inf Model, 2016, 第 11 作者
(50) Probing the structure and dynamics of caveolin-1 in a caveolae-mimicking asymmetric lipid bilayer model, European Biophysics Journal, 2016, 第 11 作者
(51) Design, Synthesis, and Biological Evaluation of Novel Tetrahydroprotoberberine Derivatives (THPBs) as Selective α1AAdrenoceptor Antagonists, Journal of Medicinal Chemistry, 2016, 第 11 作者
(52) Cu(II)-Catalyzed C6-Selective C-H Thiolation of 2-Pyridones Using Air as the Oxidant, RSC Advances, 2016, 第 11 作者
(53) Combinatorial Pharmacophore-Based 3D-QSAR Analysis and Virtual Screening of FGFR1 Inhibitors, Internationaljournal of molecular sciences, 2015, 第 11 作者
(54) A Genetic Algorithm Based Support Vector Machine Model for Blood-brain Barrier Penetration Prediction, BioMedRes.Int, 2015, 第 11 作者
(55) TarPred: a web application for predicting therapeutic and side effect targets of chemical compounds, Bioinformatics (Oxford, England), 2015, 第 11 作者
(56) Inhibition of human copper trafficking by a small molecule significantly attenuates ancer cell proliferation, Natrue Chemistry, 2015, 第 11 作者
(57) Conformational states of the full-length glucagon receptor, Nature Communications, 2015, 第 11 作者
(58) In silico ADME/T modelling for rational drug design, Quarterly reviews of biophysics, 2015, 第 11 作者
(59) Mechanism of the All α to All β Conformational Transition of RfaH-CTD: Molecular Dynamics Simulation and Markov State Model, Journal of chemical theory and computation, 2014, 第 11 作者
(60) Mechanism of the All α to All β Conformational Transition of RfaH-CTD: Molecular Dynamics Simulation and Markov State Model, Journal of chemical theory and computation, 2014, 第 11 作者
(61) Free energy landscape for the binding process of Huperzine A to acetylcholinesterase, Proceedings of the National Academy of Sciences of the United States of America, 2013, 第 11 作者
(62) The gating charge pathway of an epilepsy-associated potassium channel accommodates chemical ligands, Cell Research, 2013, 第 11 作者
(63) Computational methods for drug design and discovery: focus on China, Trends in Pharmacological Sciences, 2013, 第 11 作者
(64) Asymmetric One-Pot Sequential Mannich/Hydroamination Reaction by Organoand Gold Catalysts: Synthesis of Spiro[pyrrolidin-3,2'-oxindole] Derivatives, Organic Letters, 2013, 第 11 作者
(65) Conformational Transition and Energy Landscape of ErbB4 Activated by Neuregulin1β: One Microsecond Molecular Dynamics Simulations, Journal Of The American Chemical Society, 2012, 第 11 作者
(66) A Theoretical Model for Calculating Voltage Sensitivity of Ion Channels and the Application on Kv1.2 Potassium Channel, Biophysical Journal, 2012, 第 11 作者
(67) Computational screening active compounds targeting protein sequences: methodology and experimental validation, Journal of Chemical Information and Modeling, , 2011, 第 11 作者
(68) Fragment-based prediction of skin sensitization using recursive partitioning, J Comput Aided Mol Des, 2011, 第 11 作者
(69) Molecular Basis of NDM-1, a New Antibiotic Resistance Determinant, PLoS ONE, 2011, 第 11 作者
(70) Knowledge-based scoring functions in drug design: 2. Can the knowledge base be enriched, J Chem Inf Model, 2011, 第 11 作者
(71) Knowledge-Based Scoring Functions in Drug Design: 3. A Two-Dimensional Knowledge-Based Hydrogen-Bonding Potential for the Prediction of Protein–Ligand Interactions, J Chem Inf Model , 2011, 第 11 作者
(72) Multiple Pharmacophore Models Combined with Molecular Docking: A Reliable Way for Efficiently Identifying Novel PDE4 Inhibitors with High Structural Diversity, J. Chem. Inf. Model, 2010, 50, 615-625, 2010, 第 4 作者
(73) Characterization of peptide deformylase homologues from Staphylococcus epidermidis, Microbiology. 2010, 156:3194-3202., 2010, 第 11 作者
(74) Using support vector regression coupled with the genetic algorithm for predicting acute toxicity to the fathead minnow, SAR and QSAR in Environmental Research, 2010, 21: 5, 559-570, 2010, 第 11 作者
(75) Knowledge-Based Scoring Functions in Drug Design. 1. Developing a Target-Specific Method for Kinase-Ligand Interactions, J Chem Inf Model 2010, 50, 1378-1386, 2010, 第 11 作者
(76) Investigation of the Catalytic Mechanism of Sir2 Enzyme with QM/MM Approach: SN1 vs SN2, J. Phys. Chem. B 2010, 114, 11927–11933, 2010, 第 11 作者
(77) Chemical and biochemical approaches in the study of histone methylation and demethylation, Med Res Rev, 2010, Nov 9, DOI: 10.1002/med.20228, 2010, 第 4 作者
(78) How Does Influenza Virus A Escape from Amantadine, J. Phys. Chem. B, 2010, 114, 8487–8493, 2010, 第 11 作者
(79) Identification of novel 5-hydroxy-1H-indole-3-carboxylates with anti-HBV activities based on 3D QSAR studies, J Mol Model, 2010, DOI 10.1007/s00894-010-0873-7, 2010, 第 11 作者
(80) Discovery of Selective Inhibitors Against EBNA1 via High Throughput In Silico Virtual Screening, PLoS ONE 2010, Volume 5 | Issue 4, e10126, 2010, 第 11 作者
(81) The discovery of EBNA1 inhibitors: virtual screening and highthroughput screening, Expert Opinion on Drug Discovery, 2010, 5(12):1189-1203, 2010, 第 3 作者
(82) Ligand-free iron/copper cocatalyzed N-arylations of aryl halides with amines under microwave irradiation, Green Chemistry 2010, 12, 276-281, 2010, 第 11 作者
(83) 唾液酸糖苷化方法学研究进展, 化学进展, 2010, 22, 91-100, 2010, 第 11 作者
(84) 唾液酸糖苷化方法学研究进展, 化学进展, 2010, 22, 91-100, 2010, 第 11 作者
(85) Most Efficient Routes for the Synthesis of α,β-Diamino Acid-Derived Compounds, Current Pharmaceutical Design, 2010, 16, 1252-1259, 2010, 第 3 作者
(86) Efficient Synthesis of Symmetrical α,α-Disubstituted β-Amino Acids and α,α-Disubstituted Aldehydes via Dialkylation of Nucleophilic β-Alanine Equivalen, Journal of Organic Chemistry, 2010, 75, 1717-1722, 2010, 第 11 作者
(87) Metal-free Synthesis of 2-Substituted (N, O, C) Benzothiazoles via an Intramolecular C–S Bond Formation, Journal of Combinatorial Chemistry, 2010, 12, 422-429, 2010, 第 11 作者
(88) Discovery of novel Purine derivatives with potent and selective inhibitory activity against c-Src tyrosine kinase, Bioorganic Medicinal Chemistry, 2010, 18, 4615-4624, 2010, 第 11 作者
(89) Metal-free Tandem Reaction in Water: An Efficient and Regioselective Synthesis of 3-Hydroxyisoindolin-1-ones, Green Chemistry, 2010, 12, 1397-1404, 2010, 第 11 作者
(90) A Nonproton Ligand Sensor in the Acid-Sensing Ion Channel, Neuron. 2010 68(1):1-3., 2010, 第 11 作者
(91) One-pot Approach for C-C Bond Formation through Ru-amino Complex Catalyzed Tandem Aldol Reaction/Hydrogenation, Synthesis, 2010, 15, 2577-2582, 2010, 第 3 作者
(92) Silver and Gold-mediated Intramolecular Cyclization to Substituted Tetracyclic Isoquinolizinium Hexafluorostilbates, Journal of Organic Chemistry , 2010, 75, 5810-5820, 2010, 第 11 作者
(93) PharmMapper server: a web server for potential drug target identification using pharmacophore mapping approach ., Nucleic Acids Research, 2010, 38, W609–W614, 2010, 第 11 作者
(94) Inherent Dynamics of the Acid-sensing Ion Channel 1 Correlates with the Gating Mechanism., PLoS Biology, 2009, 7, e1000151, 2009, 第 11 作者
(95) (1). Site of Metabolism (SOM) Prediction for Six Biotransformations Mediated by Cytochromes P450, Bioinformatics,2009,25, 1251-8, 2009, 第 11 作者
(96) Conformational sampling on acid-sensing ion channel 1(ASIC1): implication for a symmetric conformation , Cell Research,2009,19:1035-37, 2009, 第 11 作者
(97) Lys169 of Human Glucokinase Is a Determinant for Glucose Phosphorylation: Implication for the Atomic Mechanism of Glucokinase Catalysis , PLoS ONE, 2009, 4 (7), e6304, 2009, 第 11 作者
(98) Discovering Potent Inhibitors Against the Hydroxyacyl-Acyl Carrier Protein Dehydratase (FabZ) of Helicobacter pylori: Structure-Based Design, Synthesis, Bioassay, and Crystal Structure Determination , J. Med. Chem.2009, 52, 2465-81, 2009, 第 11 作者
(99) Structural Basis for Catalytic and Inhibitory Mechanisms of beta-Hydroxyacyl-acyl Carrier Protein Dehydratase (FabZ), J Biol Chem, 2008, 283, 9, 5370–9, 2008, 第 11 作者
(100) PDTD: a web-accessible protein database for drug target identification., BMC Bioinformatics 2008, 9:104, 2008, 第 11 作者
(101) Mechanics of Channel Gating of the Nicotinic Acetylcholine Receptor , PLoS Computational Biol, 2008, 4, e19, 2008, 第 11 作者
(102) Predicting protein-protein interactions based only on sequences information, PNAS 104(11) :4337–4341,(2007), 2007, 第 11 作者
(103) Discovering Potassium Channel Blockers from Synthetic Compound Database by Using Structure-Based Virtual Screening in Conjunction with Electrophysiological Assay, J. Med. Chem. , 50, 83-93, (2007), 2007, 第 11 作者
(104) Detailed Mechanism for AmtB Conducting NH+ 4/NH3: Molecular Dynamics Simulations , Biophysical Journal. 92, 877–885,(2007), 2007, 第 11 作者
(105) Conformational transition pathway in the allosteric process of human glucokinase, PNAS 103 , 36, 13368–13373 (2006), 2006, 第 11 作者
(106) Peptide deformylase is a potential target for anti-Helicobacter pylori drugs: Reverse docking, enzymatic assay, and X-ray crystallography validation, Protein Science, 15:2071–2081. (2006), 2006, 第 11 作者
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